Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MEVKNCCMVTEFILLGIPHTEGLEMTLFVLFLPFYACTLLGNVSILVAVMSS-ARLHTPMYFFLGNLSVFDMGFSSVTCPKMLLYLMGLSRLISYKDCVCQLFFFHFLGSIECFLFTVMAYDRFTAICYPLRYTVIMNPRICVALAVGTWLLGCIHS-SILTSLTFTLP-----YCGPNEVDHFFCDIPALLPLACADTSLAQRVSFTNVGLISLVCFL---LILLSYTRITISILSIRTTEGRRRAFSTCSAHLIAILCAYGPIITVYLQPT-----PNPMLGTVVQILMNLVGPMLNPLIYTLRNKEVKTALKTILH------------------RTGHVPES |
| 1U19 Chain:A ((4-349)) | MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF-TWVMALACAAPPLVGWSRYIPEGMQCSCGID----YYTPHEETN----NESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259325 for 2296 contacts (-112.9/contact) +
2D Compatibility (PS) -30262 + (NN) 5248 + (LL) 328
1D Compatibility (HY) 0 + (ID) 1100
Total energy: -285111.0 ( -124.18 by residue)
QMean score : 0.151
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