Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDSTFTGYNLYNLQVKTEMDKLSSGLDIYRNPLKNKTEVTMFILTGFTDDFELQVFLFLLFFAIYLFTLIGNLGLVVLVIEDSWLHNPMYYFLSVLSFLDACYSTVVTPKMLVNFLAKNKSISFIGCATQMLLFVTFGTTECFLLAAMAYDHYVAIYNPLLYSVSMSPRVYVPLITASYVAGILHATIHIVATFSLSFCGSNEIRHVFCDMPPL-LAISCS-------DTHTNQLLLFYFVGSIEIVTILIVLISCDFILLSILKMHSAKGRQKAFSTCGSHLTGVTIYHGTILVSYMRPSSSYASD-------HDIIVSIFYTIVIPKLNPIIYSLRNKEVKKAVKKMLKLVYK----------------
1F88 Chain:A ((1-348))MNGTEGPNFYVPFSNKTGV---------VRSPFEAPQ-------YYLAEPWQFSMLAAYMFLLI-MLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPM----------------SNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAASATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPSTTVSKTETSQVAPA


General information:
TITO was launched using:
RESULT:

Template: 1F88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -232826 for 2512 contacts (-92.7/contact) +
2D Compatibility (PS) -30270 + (NN) 2280 + (LL) 2712
1D Compatibility (HY) -22000 + (ID) 2400
Total energy: -282504.0 ( -112.46 by residue)
QMean score : 0.250

(partial model without unconserved sides chains):
PDB file : Tito_1F88.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1F88-query.scw
PDB file : Tito_Scwrl_1F88.pdb: