Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMT-LSIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV |
| 1U59 Chain:A ((17-269)) | ------------------------------------ELGCGNFGSVRQGVYR----KQIDVAIKVLKQGTEK----ADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVMEMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNR-HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--------------PEVMAFIEQGKRMECPPE----CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89135 for 1975 contacts (-45.1/contact) +
2D Compatibility (PS) -27467 + (NN) -22236 + (LL) 2520
1D Compatibility (HY) -12800 + (ID) 2650
Total energy: -151768.0 ( -76.84 by residue)
QMean score : 0.462
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