Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSYKFLKEVLHRLKNIENTLKVLDQSQLNVEDKVEQMGLLEEIRHEIISHNIIKESLAEAGTPSNKKKGDSWQLKLIERMHKSNSAIPIDLVKSLSKVKIECQNLRRLSQSEPSSLEKLKERFADLVKLIRGVVSIKSQQLKCSKYDSLLADYDSDITEKDVKEIFPKLGKF---------------FSDNIDRIIEKQKKDKITNTQKIATQKQIELGSLCLQQIGVTSHHTFYHHPIDYDESDF----------------CYGLFLLLRYSGHEI---YQRCLAQNSISS------------SFTRYIMCETQGLFMERMIGTSREFIEFIQP----YIKEKLTIKGKVNAKINSVENLYLIFNKVNLSSPLKKADEFSLLANIMLRTKLEQDIINGTLEVKDLHDAWLEGMEHYKIPV-KAKNELDTYFQDEYWVSGTMGYFPIKIIALIIAVQIFSFIKKNHYEFL-GAIIKGDFGLLIGWLSQNVCSAKCGFLDLLKKVTGKGLDVECCSSYLS--EKYDLSQ--------- |
| 4TR2 Chain:A ((54-627)) | ----DDVHKIISELRFLQKVETILESSNMSVSDV---------------------EADANAYNPDRDAP--------KEELQKLQDKKSLRLIVSENH------------ATSPSFFEE-----SLLQEDVVSFIQSKGKLSNLKNLKSMIIDLNSDMTDEELAEYISLLERKGALIESDKLVGADYKFNDEYRNLQWGLDLARLDETQDLINANRVSVTKICVIDSGIDYNHPDLRNNIDVNVKELHGRKGVDDDSNGVVDDVYGANFV-NNSGDPMDDNYHGTHVSGIISAVGNNGIGIVGVDGHSKLVICKALDQHKLGRLGDMFKCIDYCISRQAHMINGSFSFDEYSNIFNASVEHLRSLGILFFVSASNCAHDKLS-----------KPDIAKCDLAVNHRYPPILSKTHNNVIAVANLKRDLD----ESYSLSVNSFYSNIYCQLAAPGTNIYSTTPMNNYRKLNGTSMASPHVAAIASIVRSI-NPNLTYLQIVEILRNAIVKLPSLTERVSWGGYVDILRAVNLAIDSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49102 for 3440 contacts (-14.3/contact) +
2D Compatibility (PS) -41866 + (NN) 573 + (LL) 6816
1D Compatibility (HY) -20000 + (ID) 3850
Total energy: -107429.0 ( -31.23 by residue)
QMean score : 0.232
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