Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------MAYPDFTLENKLSGVIAGVDEVGRGPLAGPVMSAAVVFTNRNIII---EGINDSKKLTAKNRQVLYEKIISVAKFGIGMASVAEINSYNILQATKLSMERALVNLGIEL----------DYVLVDGNQPPKVKWQ------------VKSIVKGDSLSVSVAAASIVAKVARDQLMQELHNQYPEYNWYKNKGYGTKGHIDAINLYGV--TEHHRKSFAPILNSTKRALL----- |
| 3ASM Chain:A ((2-309)) | SNYVIQADQQLLDALRAHYEGALSDRLPAGALFAVKRPDVVITAYRSGKVLFAGKAAEQEAAKWISGASASNETADHQPSALAAHQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHIAKIAALGVKDSKQLNDEAIKRIAPAIMETVPHAVTVLDNPQYNRWQRSGMPQTKMKALLHNRTLVKLVDAIAPAEPEAIIIDEFLKRDSYFRYLSDEDRIIRERVHCLPKAESVHVSVAAASIIA---RYVFLEEMEQLSRAVGLLLPKGAGAIVDEAAARIIRARGEEMLETCAKLHFANTKKALAIAKRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ASM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34922 for 1639 contacts (-21.3/contact) +
2D Compatibility (PS) -21769 + (NN) -10166 + (LL) 400
1D Compatibility (HY) -3600 + (ID) 2300
Total energy: -72357.0 ( -44.15 by residue)
QMean score : 0.286
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