Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MYNIKLYYSSYLRYNIRSSLYIPFKPN----ILVKLDILKNEVLSLKTVSPE--KVVEVSNL-IDKFRLKILTDFQNFEKQWFQEFKNTWKQKLMPNMRSEYLGLHCTKIY------------------------------------------------------------------------------------------------------- |
2Y26 Chain:A ((1-504)) | GLAGRGVIYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGLVMPTFKIVIRLPANAFTGLTWVMSFDAYNRITSRITASADPVYTLSVPHWLIHHKLGTFSCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEATSFLGKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALRSAGLTLGQVPMVGTTKVYNLNSTLVSCVLGMGGTVRGRVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEVKIRSPYHRTPARLLADQSQRDMSSLNFYAIAGPIAPSGETAQLPIVVQIDEIVRPDLSLPSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSN---TCRVSMGENPFAAMIA-CHGLHSGVLDLKLQWSLNTEFGKSSGSVTITKLVGDKAMGLDGPSHVFAIQKLEGTTELLVGNFAGANPNTRFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSFPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y26.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18295 for 359 contacts (-51.0/contact) +
2D Compatibility (PS) -10150 + (NN) 5189 + (LL) 512
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -27744.0 ( -77.28 by residue)
QMean score : 0.071
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