Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQVYQLVAPR-QFEVTYNNVD-IYSDYVIVRPLYMSICAADQRYYTGSRDENVLSQKLPMSLIHEGVGEVVFDSKG--VFNKGTKVVMVPN-TPTE---KDDVIAENYLKSSYF---------RSSGHDGFMQDFVLLNHDRAVPLPDDIDLSIISYT-ELVTVSLHAIRRFEKKSISNKNTFGIWGDGNLGYITAILLRKLYPESKIYVFGKTDYKLSHF-S-FVDDVFFINKIPEGLTFDHAFECVGGRGSQSAINQMIDYISPEGSIALLGVSEFPV--EVNTRL-VLEKGLTLIGSSRSGSKDFQDVVDLYIQYPDIVDKLALLKGQEYEIATINDLTEAFEADLSTS-WGKTVLKWIM |
| 3TWO Chain:A ((3-344)) | VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKE----GIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSK---VTKGTKVGVAGFGGLGSMAVKYAVA-MG-AEVSVFARNEHKKQDALSMGVKHFYTDPK-QCKEELDFIISTIPT---HYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSI-KH----NIYPEIDLIL----GKDIDTAYHNLTHGKAKFRYVIDMK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212440 for 2713 contacts (-78.3/contact) +
2D Compatibility (PS) -34240 + (NN) -10109 + (LL) 1820
1D Compatibility (HY) -8400 + (ID) 2550
Total energy: -265919.0 ( -98.02 by residue)
QMean score : 0.418
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