Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHYSYEAFLKDSLELAKQVERLCGIPEALVCVMRGGMTLVHFLSLHWNLREVYGINAISYDTTKRQNALKIENTPTIKDHLKTILVVDEIVDSGNSLEAVLKVLQDKHPDKKFYSASLFQKTSAKYK-ADAFLKD-APEWIDFFWEVDLKNLKSH
1NUL Chain:A ((5-143))
YIVTWDMLQIHARKLASRLMPS-EQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISS---------LKVLK--RAEGDGEGFIVIDDLVDTGGTAVAIREMYP-----K-AHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPI
General information:
TITO was launched using:
RESULT:
Template:
1NUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112749 for 978 contacts (-115.3/contact) +
2D Compatibility (PS) -13544 + (NN) -3545 + (LL) 316
1D Compatibility (HY) -6400 + (ID) 1250
Total energy: -137172.0 ( -140.26 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_1NUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NUL-query.scw
PDB file :
Tito_Scwrl_1NUL.pdb
: