Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRCLTCLKLSFKPLCPNCLNDLPLSLKLRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILP-LLSQKAGAEFVKILQEQGLNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRN-FTFRGDESLDYFLLDDIITTGTTLKEALKYLKTLNIKAHFAIALCSADE
2WNS Chain:A ((37-150))
-----------------------------------------------------GIVSRPRLLSQVADILFQTAQNAG---ISFDTVCGVPY-----TALPLATVICSTN----QIPML--IRRKETKDYGT----KR--LVEGTI----NPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQ
General information:
TITO was launched using:
RESULT:
Template:
2WNS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58147 for 794 contacts (-73.2/contact) +
2D Compatibility (PS) -11564 + (NN) -1811 + (LL) 4988
1D Compatibility (HY) -5600 + (ID) 700
Total energy: -72834.0 ( -91.73 by residue)
QMean score : 0.335
(partial model without unconserved sides chains):
PDB file :
Tito_2WNS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WNS-query.scw
PDB file :
Tito_Scwrl_2WNS.pdb
: