Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIKKSELYSSLWAGADSLRGGMDASEYKNYVLNLLFLKYISDKAKNNMDSEIEVPQGCFYEDILALEGDKEIGDKLNKIIAKIAERNDLKGVIDSVDFNDNTKLGEGKAMIDTLSNLVKIFADLSLGAHGALDDDLLGDAYEYLMRHFASESGKSKGQFY-TPSEVSLLLSLLLGIDENTRQDKSIYDPTCGSGSLLLKASSLAGKKGLTIYGQEKDISTTALCKMNMILHNSATADIAKGGSSTLSNPLFTTENGMLKTFDYVVANPPFSLKNWTDGLSIDPKSKQVINDSFNRFEDGTPPEKNGDFAFLLHIIKSLNPTGKGAVILP--HGVLFRG--NAEAQIRKNLLMKGYIKGVIGLAPNLFYG-TSIPACVIVLDKENAHARKGVFVIDASKDFKKDGNKNRLREQDVQKMIDTFNALKEIPYYSKMVSLEEISLNDYNLNIPRYIAAKQELEKDLFALINSPSYLPKNEIKAYDPYFQVFKELKNTLFKKSDKEGYYALKTECENIKDLITQSLEYQTFHASVLSAFESLDLFTTFNDLEPGFNPKTLIESVCSKVLKEFEKVGILDKYGVYQLFKDYYNEVLQDDWFLISFNGFRSAKELRKLTPLKDKNKKANYLEEPDFIVQKTYYKSDLIPKHLIKQRFFEKETKELEELENALNEKEALLDEFIEEHSNEEGLFDGLKINESVLKKELKNATDLEDKQILKTALEWLEAKNKALKMKNKAYEELELKAFHQYKNLEINEIKDLIIKDKWLNSLKNALENKIQKRTNAFASALNEIISSYSNSLLELDKEVKESESKVLEHLKDLGLMG |
2H1R Chain:A ((2-178)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------HLLKNPGILDKIIYAAKI----KSSDIVLEIGCGTGNLTVKLLPL----AKKVITIDIDSRMISEVKKRCLYEGYNNLEV------AIKTV--------FPKFDVCTANIPYKIS-SPL---------------IFK--------------LIS--HRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKVCNVNRSSFNPPPKVDSVIVKLIPKESSFLTNFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLEHNYKNWCTLNKQVPVNFPFKKYCLDVLEHLDMCEKRSINLDENDFLKLLLEFNKKGIHFF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H1R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72966 for 1246 contacts (-58.6/contact) +
2D Compatibility (PS) -18012 + (NN) -10569 + (LL) 34716
1D Compatibility (HY) -9200 + (ID) 1000
Total energy: -77031.0 ( -61.82 by residue)
QMean score : 0.233
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