Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQQKKIQILKDLVNIDSTNGHEEQVANYLQKLLAEHGIESEKVQYD----LDRASLVSEI-GS--SNEKVLAFSGHMDVVDAGDVSKWKFPPFEATEHEGKLYGRGA----TDMKSGLAAMVIAMIELHEEKQKLNGKIRLLATVGEEIGELGAEQLTQKGYADDLDGLIIGEPSG--HRIVYAHKGSINYTVKSTGKNAHSSMPEFGVNAIDNLLLFYNEVEKFVKSIDATNEILGDFIHNVTVIDGGNQVNSIPEKAQLQGNIRSIPEMDNETVKQVLVKIINKLNKQENVNLELIFDYDKQPVFSDKNSDLVHIAKSVASDIVKEEIPLLGISGTTDAAEFTKAKKEFPVIIFGPGNETPHQVNENVSIGNYLEMVDVYKRIATEFLS |
| 3RZA Chain:A ((22-392)) | -NEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIE--VPKLYLTSHMDTVVP----AINVKPIV--KDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEESGLIGAKELNSELL--DADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLGQ--V------DEITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTVEQSYPGFKINDNEAVVKIAQESARN-LGLSANTIISGGGSDGSIIN--TFGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79982 for 3111 contacts (-25.7/contact) +
2D Compatibility (PS) -37886 + (NN) -14779 + (LL) 1112
1D Compatibility (HY) -8400 + (ID) 4100
Total energy: -144035.0 ( -46.30 by residue)
QMean score : 0.453
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