Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKEERLGVLLWFRFSRFYNRNMKLTNQNLRAAGISTAQFDCIAQIGL-DKEITQQQLAEKLVVTKGNVTQLLAKLEQLGYITRTK---TGREKHITLTEKGQACYRENVPKQEAFQQAQFDKLTRDEQKELLKLLKKLGE
2FBH Chain:A ((10-140))
------YFGTLLAQT----SRAWRAELDRRLSHLGLSQARWLVLLHLARHRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLIADIEAIAASVRNDVLTGIDESEQALCQQVLLRIL-
General information:
TITO was launched using:
RESULT:
Template:
2FBH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30653 for 776 contacts (-39.5/contact) +
2D Compatibility (PS) -13845 + (NN) -6466 + (LL) 1176
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -57988.0 ( -74.73 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_2FBH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FBH-query.scw
PDB file :
Tito_Scwrl_2FBH.pdb
: