Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTGIHHVSIFTANARANFDFYTKIMGLRLVKKSVNQDDP-YTYHLYYGDEIGSPGTALTFFEVPNMA------------------------KNHPSRNAISGLSLRVPSDEALHYWDKRLDEHRIFHSK-PIDQ-FGRKIIRLKDTDGLPVNLISDETSTQVTEVTPWEDS--------LVPAEYAIRGLGPVRFSVFKKEKTDRLLTKILGFERIGAYEDDD-KLVTVFKTGNVGLGGEVHVESRPDL-E-----QGNLGAGGIHHVAFRVPTDGDLIGWTEMIQDL----GYKNSGY-VDRFY---------------------FHSLYFRESNGILIELATDEPGFQTDFTKEHGTYVDLPPHLEERREDILAHLKPLDTDK |
| 1SQD Chain:A ((21-373)) | FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLT----SGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVED---AESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAE--------FLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFT---SGLNSAVLASN-DEMVLLPINEPVHGKSQIQTYLEHNEGAGLQHLALMSED---IFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQIFTKPLGD------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SQD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99305 for 2003 contacts (-49.6/contact) +
2D Compatibility (PS) -28418 + (NN) -10782 + (LL) 2436
1D Compatibility (HY) -9600 + (ID) 1900
Total energy: -147569.0 ( -73.67 by residue)
QMean score : 0.331
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