Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MAEYQSQLARIQA-KITT-LKEKDVDLNLFGS-ESHAYKLNQPLSNQT--------------------IAAFENEHQIALPQGYRAFLEQIGDGGMGPYYGL---ETLVDGLCS-SLDYKAEKYGVQTLSKPFPHTDDWNGPGYKEGMSDEAYDAWQELC-------FSDKEVF------GL-LRIANF-------GCGVSINLVVNGPSYGEIWVDDRNNDNGVYPDFYFGNEERLGFLEWYELWLDKS--IEEFEKA |
| 4RHO Chain:A ((4-259)) | DKIHHHHHHENLYFQGMEIKAMFRDVSLSSRNFSEMLSRESKVVAALAAKSPLMAHANWRLKGNSLEEATLYPAFDADGSPSTPALAVLNEEQRGKKHSASHAAIWNGNTRPNEGASMSCHVSDEKVLPDRFSTRLGVPDCYAKSQDLADVVTTIVAAFNPLVVEASPEGYFDKQVFDDKPGVGWMLYLPKVITQQQVPEARALIPVSAKGKQTGTIIVSVTD------APFSVDNPEHVAIANRIEIRLVDQDLLPAYVDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20377 for 1358 contacts (-15.0/contact) +
2D Compatibility (PS) -21480 + (NN) -2205 + (LL) -124
1D Compatibility (HY) -4800 + (ID) 1850
Total energy: -50836.0 ( -37.43 by residue)
QMean score : 0.164
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