Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKGILNVLLVFALIAGLSVPSSMQVEAAAPTIKVHFIDVGQGDAIYIKAPSGEDILIDAGNKGKGKTVVNYLKKLK--VKDIEIMIASHSDADNIGGLPEVMNNIKVKNLYAPKSTNTT--AA-----YKNFVNTA-----------KKKKLTIKTAKAGVKLPVKG-VNAQFVGPV-KTYGKTDRNNWSAVLHVAYKKNTFLFTGDAQTKAENDMIKAKKTLRADVLKVSTQGSKAATSKAFVNVVKPKYAIISVGKNGYGHPTSQTVNTLKKAKAKVYRTDRNKTVVVTGNGSSYSIGK |
2VW8 Chain:A ((13-184)) | -------------------------------DDDLCLLGDVQVPVFLLRLGEASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHS-------DDHVVFYD--VRRRRLFCGDALGE------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46789 for 1202 contacts (-38.9/contact) +
2D Compatibility (PS) -15679 + (NN) -2150 + (LL) 8264
1D Compatibility (HY) -8800 + (ID) 1100
Total energy: -66254.0 ( -55.12 by residue)
QMean score : 0.482
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