Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYVEQLNEQMVIKRDGRKASFDLIKIRNAVEASMKAINLEDETFLEEILLEVVSELPNKADMTIDEIQHCVENTLMKSTYPDVARAYIEYRHDRDHERENITDMHKSVEKLLQKDKTVVNENANKDATVFNTQRDLTAGAVAKSYALKYMLPKHVSNAHLKGEIHFHDLDYSPYHAMTNCCLIDIEGMLSKGFTIGNANVESPKSIQTATAQIAQIIANVASSQYGGCSVDRIDEVLSVYARLNFEKHKKDAMEWVVPEKQEGYAAEKTRKDIYDAMQSLEYEINTLYTSNGQTPFVTLGFGLGEDWFAREIQKAILKVRIGGVGKDKHTAIFPKLVFSIRRGTNLNAEDPNYDIKQLALECSSKRMYPDVLNYDSLVRLTGDFKVPMGCRSFLPAWENENGEHVNAGRNNLGVVTLNIPRIAIQSGGDKERFWEIFHERMKTVKDALLFRLNRVRQARPENAPILYKYGAFGKRLQDGEDVDQLFNKERSTISIGYIGLYEAATVFYGGEWEGDKEAKNFTLDIVKELKAYADNWKDEYGYWFSVYSTPSESLTDRFNRLDKEKYGVIKDITDKDYYQNSFHYDVRKKIDFEKDYPEFCSGGFIHYCEYPKMVHNTKALEAVWDYSYDRVAYLGTNTPIDKCYECDFEGEFVPTEEGFKCPSCGNTDPEKADVVKRTCGYLGNPMKRPMVHGRHVEISNRVKHMENLGE |
2XAP Chain:A ((4-71)) | -------NLLVTKRDGSTERINLDKIHRVLDWAAEGLHN---VSISQVELRSHIQF--YDGIKTSDIHETIIKAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37918 for 364 contacts (-104.2/contact) +
2D Compatibility (PS) -6752 + (NN) -2478 + (LL) 38808
1D Compatibility (HY) -800 + (ID) 500
Total energy: -9640.0 ( -26.48 by residue)
QMean score : 0.679
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