Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKMGFIGNGKSTNRYHLPFILERDNIEVKTIYNRNP-KT-ATWDKIEGVHYTTDLDELLKDPEIQLITISTTQSSHFDYAKMVLENGKNVLVEKPFMMTYAEAKEIFELAKERGLLVQCYQNRRFDSDFLTAQKVIESGKLGELLEVEMHYDYFRPEIPESVHEFKFYDSYLYGHGCHTIDQVLSYFGKPDNIHYDVRQLLGEGRMNDYFDLDLYYGVTKVSVKSSYFRIKARPSFVLYGKKGTFTKETKDRQEEHLKLFYMPSNPDFGIDLPEHYGTLTYVDDAGVWHEEKVISEV-GDYGRVYDDLYEAIINGKPKQVTDEETLLQMEILEKGVEACK |
| 3E82 Chain:A ((7-338)) | TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRD---LPDVTVIASPEAAVQHPDVDLVVIASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQGTLGAVKHFESHFDRFRPEV----------SGLWFDLGPHLIDQALQLFGLPQSVQGNIATLRDGAEINDWAHVVLNYPAHKVILHCSMLVAGGSSRFTVHGDKGSVIKARADQQESQLLAGVVPGSADWGQDD----DPLVIYDA-SL--QAHAQATPQGDQRQYYMLIRDALKGQIANPVPPVEALAVMAVLEAAVRSAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129715 for 2702 contacts (-48.0/contact) +
2D Compatibility (PS) -35080 + (NN) -19536 + (LL) 1284
1D Compatibility (HY) -20000 + (ID) 4600
Total energy: -207647.0 ( -76.85 by residue)
QMean score : 0.497
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