Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MKNILLVCNAGM-STSFLVEKMKAAGTEQGVEANIWAVS----DAELHENWEKADVILLG-PQV---GYLKGNTEKVVGGKIPVEVINMLDYGRVNGAAVLERAIELIG-------------------------------------------
3FNI Chain:A ((2-155))
KAETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGAAVDLQELRELVGRCTGLVIGMSPAASAASIQGALSTILGSVNEKQAVGIFETGGGDDEPIDPLLSKFRNLGLTTAFPAIRIKQTPTENTYKLCEEAGTDLGQWVTRDRLEHH
General information:
TITO was launched using:
RESULT:
Template:
3FNI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25053 for 665 contacts (-37.7/contact) +
2D Compatibility (PS) -11396 + (NN) -7468 + (LL) 0
1D Compatibility (HY) -400 + (ID) 600
Total energy: -44917.0 ( -67.54 by residue)
QMean score : 0.356
(partial model without unconserved sides chains):
PDB file :
Tito_3FNI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FNI-query.scw
PDB file :
Tito_Scwrl_3FNI.pdb
: