Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEAIERRDDDMTIVSFEVEISAPIQEVFALLTTNTGLAKWFNELEVGELGADGYLLFVMTPEEKITMPIRAFEPNQKLAFEWDQ--DEVAFELNEITANKTRLTFTEQLTTITE------------HSPRDISGWHICL-KKLQASAEGKIYDFNKTEFKTLFAKYQKELNIEK
1XN6 Chain:A ((5-143))
---------NTLNDIKQTIVFNASIQKVWSVVSTAEGIASWFMPN-DFVLEVGHEFHVQSPF-GPSPCKVLEIDEPNHLSFSWDTDGWVVSFDLKDLGDNKTEFTLIHGGWKHPDEILPKANAKSSIIRDRMSGGWVAIVNEKLKKVVEG-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50154 for 850 contacts (-59.0/contact) +
2D Compatibility (PS) -12860 + (NN) 1487 + (LL) 3184
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -66943.0 ( -78.76 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_1XN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XN6-query.scw
PDB file :
Tito_Scwrl_1XN6.pdb
: