Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSFQIKTKVAFGTNSLQVLKE----IKNKNVWIICD---RFLADGEGLQGLIGQLDASNNVHIFTDVVPDPPISKVAGGVSEAGKIQPQVMIAFGGGSAIDTAKGI----------YYFAKRLEKIN-ISTFIAIPTTSGTGSEVTAATVITDPTTKIKYPLFLDELIPDMAILDAQLVVTVPPAITANTGMDVLTHAIEAYVSKDASDYTDALGEKSVQLTLRFLTSCYDDGRNLADREKMHNASTMAGMAFNCANLGLNHSIAHQLGAQFHVPHGLANAILLDAVIRFNAFKNRETEQKYAEMARICGIASRSDSNETAVRLL--RERIVAMMEHMQM----PRTLTDAGVAKEKVYAKMDEIATNALKDACLPTSPTTPTHQELKEILEQII |
3BFJ Chain:B ((16-385)) | -----------FGPNAISVVGERCQLLGGKKALLVTDKGLR--KDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEVTRHCVLTNTETKVKFVIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQAREYMAYASLLAGMAFNNANLGYVHAMAHQLGGLYDMPHGVANAVLLPHVARYNLIANPE---KFADIAELMG------ENITGLSTLDAAEKAIAAITRLSMDIGIPQHLRDLGV-KETDFPYMAEM---ALKDGNAFSNPRKGNEQEIAAIFRQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150526 for 3134 contacts (-48.0/contact) +
2D Compatibility (PS) -37156 + (NN) -12570 + (LL) 2640
1D Compatibility (HY) -23200 + (ID) 7000
Total energy: -227812.0 ( -72.69 by residue)
QMean score : 0.456
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