Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNKKILFGTG---LAGVGLLAAAGYTLTKKVTDYKRQQITQTLREFFSQMGDIQVFYFNEFESDIKMTSGGLVLEDGRIFEFIYRQGVLDYVEVSK
1A0F Chain:A ((1-80))
---MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLENG-DDYFAVNPKGQVPALLL-------DDGTLLTEGVAIMQYLADS------VPDR
General information:
TITO was launched using:
RESULT:
Template:
1A0F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31296 for 482 contacts (-64.9/contact) +
2D Compatibility (PS) -8145 + (NN) -2002 + (LL) 1380
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -43613.0 ( -90.48 by residue)
QMean score : 0.306
(partial model without unconserved sides chains):
PDB file :
Tito_1A0F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A0F-query.scw
PDB file :
Tito_Scwrl_1A0F.pdb
: