Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNVTSYKEMLAKPWGKIQYEITFAQLSHIKNQNVLDFGAGFCLTAQHLAKE-NNVTAIEPNPKLLYDNQSDNIYK-ILGSYEA--LRDLPNQSFDTIICHNVLEYIDKHNHPAYFDEFSRLLKPNGELSLIKHNITGKILQS-VIFSNDTSTAMELLTGEANFKSASFDQGNIYTLEELKQNT---NLLVERYQGIRTFYSLQPNHFKTETGWLNKMLAIELSVADKAPYKDIAFLQHITLKKSL |
| 3CC8 Chain:A ((32-186)) | ------------------------------EWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEK-LDHVVLGDIETMDMP-YEEEQFDCVIFGDVLEHLF--DPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAG-NWTYTEYGLL--------DKTHIRFFTFNEMLRMFLKAGYSISKVDRVYVDHKMYEPLIEELYGICKKYRLGSGFMAETVVFQYIIEAEKSQL---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CC8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -52332 for 1051 contacts (-49.8/contact) +
2D Compatibility (PS) -15053 + (NN) 2820 + (LL) 3152
1D Compatibility (HY) -8800 + (ID) 1250
Total energy: -71463.0 ( -68.00 by residue)
QMean score : 0.328
|
|
|