Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MNRLENIISLVSQYQKIDVNTLSELLQVSKVTIRKDLDKLEGKGLLHREHGYAVLNSGDDLNVRLSFNHKTKKEIAALAANMVSDNDTILIESGSTCALLAENICQTKRNVTILTNSCFIANYLREYDSCQIVLLGGEY---QSSSQV-----TVGPLLKKMISL---FHVSLAFVGTDGF----------DPKLGFMGRDLMRSEVAQEMANAAD----EVIILT-----DSSKFNQTALVEQLPLSTVSQVITDKHPNSEIANLFQEAEITIQSLLQVP---------- |
| 5A3A Chain:A ((13-302)) | NWTTNLTQAEQLAQLIKEAD-------ALVVGIGAGMSAADGFTYIGPRFETAFPDFIAKYQFLDMLQASLFDFEDWQEYWAFQSRFVALNY--LDQPVGQSYLDLKEILETK-DYHIITTNADNAFWVAGYDPHNIFHIQGEYGLWQCSQHCHQQTYKDDTVIRQMIAEQKNMKVPGQLIPHCPECEAPFEINKRNEEKGMVEDADFHAQKARYEAFLSEHKEGKVLYLEIGVGHTTPQFIKHPFWKRVSENPNALFVTLNHKHYRIPLSIRRQSLELTEHIAQLISATKTIYQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38817 for 1737 contacts (-22.3/contact) +
2D Compatibility (PS) -26048 + (NN) -9603 + (LL) 888
1D Compatibility (HY) -10000 + (ID) 1900
Total energy: -85480.0 ( -49.21 by residue)
QMean score : 0.224
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