Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKQLLTQKYTNDVQQNSQKHFGYLTERMYSYRDKVLDKKPFIDAERAILVTEAYQKHQEKPNVLKRAYMLQNILEKMTIYIDDETMIVGNQASSDKDAPIFPEYTLEFVVNELDLFEKRDGDVFYITEETKEQIR-NIAPFWENNNLRARAGVMLPEEVQVYMETGFFGMEGKMNSGDAHLAVNYQKLLEEGLIGFEKKARKAKADLDLTKPESIDKYHFYDSILITIEAVKTYAERFAILAKKQAKTAN-AKRRQELLDIASICERVPYYPAETFAEAVQSVWFIQCILQIESNGHSLSYGRFDQYMYPYVKSDLEAGRETEDSIVERLTNLWIKTITINKVRSQAHTFSSAGSPLYQNVTIGGQTRHKEDAVNPLSFLVLKSVAQTHLPQPNLTVRYHANLDKSFMNEAIEVMKLGFGMPAFNNDEIIIPSFIKKGVSEEDAYDYSAIGCVETAVPGKWGYRCTGMSYINFPKVLLITMNDGIDPASGKRFAPSYGHFTQMTSYKELKEAWDKTLRYLTRMSVIVENAIDISLEREVPDILCSALTDDCIGRGKHLKEGGAVYDYISGLQVGIANLSDSLAALKKLVFEEKRLTTLEVWQALQSDYAGPRGEEIRQMLINEAPKYGNDDDYADSLVRECYDVYVEEIAKYPNTRYGRGPIGGIRYSGTSSISANVGQGRGTLATPDGRHAGTPLAEGCSPSHNMDKKGPTSVLKSVSKLPTDEIVGGVLLNQKVNPQTLAKEEDKQKLIALLRTFFNRLHGYHIQYNVVSRETLIDAQKHPEKHRDLIVRVAGYSAFFNVLSKATQDDIIARTEHAL |
2F3O Chain:A ((4-776)) | --------------------------DRIEKLIKKVSK-PARLSVERCRLYTESMKQTEGEPMIIRQAKALKHVLENIPIQILDSELIVGTMLPNPPGAIIFPEGVGLRIINELDSLPNRETNRLMVDEEDAKVLREEIAPYWQRKTIEAFAFPLMPDIMQILY-TGSVF-VLTEIAGISHVAVNYPYLLRRGFRWFLEESERRIRALEESGVYEGEKYSFYQAAKIVSEAVINYGLRYSKLAEELAES-EDGERREELLKIAEICRKVPAEKPETFWEAVQFVWLVQSALHQENYEQAISMGRIDQYLYPFFKKDIGEGRINRELAFDILANLWIKTNEIVPAFDSLLEQYFSGQATNQAVTIGGCDIYGNDATNELTYLMLEVTDRLRLRQPNVHVRINKGSPESFLKRLAEAISSGCNNLALFFDDAAVKALKNAEVDDRDALNYTTDGCVEIAPFGNSFTSSDA-ALINVAKALEYALNEGVDLQFGYEFGAKT---EKPKFLEDLLEKLREQVSHIVKLVVRGSNVLSYANAEVKPTPLLSLCVEDCFEKGVDVSRGGARYNFTGIQAVGIADVGDSLVAIEGALN--AGYSMDDIVEACRKNFVGY--EKLHKLLL-QSPKYGNDDDAADKYTKMVLEWYCEEVNRH-RNFRG-----GKFAAGCYPMTTNVGFGFFTSALPSGRKSGEPLNPGVSPSTGMDREGVTAVINSASKLSYENLPNGASLTINLSSDV-LGEKGDAVIEALIKSSM-ELGVMHVQFNILKEDLLRKAQQEPEKYRWLLVRVAGWSAYFVELSRPVQEEVIRRISCRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -297216 for 7555 contacts (-39.3/contact) +
2D Compatibility (PS) -84011 + (NN) -49948 + (LL) 2416
1D Compatibility (HY) -43200 + (ID) 12500
Total energy: -484459.0 ( -64.12 by residue)
QMean score : 0.494
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