Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFSKKDKYIRISPNKALGSSDKRSLPEVPDELFAKCPSCKHMIYQKDLGLAKICPACSYNFRISAQERLLLTVDEDSFEELFTGIETKDPLNFPNYREKLAATRQKTNLDEAVVTGLAKIKGQTTALAIMDSHF--------------IMASMGTVVGEKLTRLFELATEKKLPIVIFTASGGARMQ---E--GIMSLMQMAKVSAAVKRHSNQGLFYLTILTDPTTGGVTASFAM-----EGDIILAEPQALVGFAGRRVIETTVR-EDLP-----------------------EGFQKAEFLLEHGFVDAIINRTELRDCIAQLIAFHGNEVGHE |
| 1PIX Chain:A ((309-563)) | ---------------------------------------------------LYSMVPL-NDKRAYDIYNVIARLFDNSELHEYKKG------------------------YGPEMVTGLAKVNGLLVGVVANVQGLLMNYPEYKAAGSVGIGGKLYRQGLVKMNEFVTLCARDRLPIVWIQDTTGIDVGNDAEKAELL--GLGQSL---IYSIQTSHIPQFEITLRKGTAAAHYVLGGPQGNDTNAFSIGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQAFYTKSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNPESI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143909 for 1651 contacts (-87.2/contact) +
2D Compatibility (PS) -22808 + (NN) -11475 + (LL) 4532
1D Compatibility (HY) -10000 + (ID) 1550
Total energy: -185210.0 ( -112.18 by residue)
QMean score : 0.407
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