Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------MSQKNNRLGYFGRQKQAFDDYVFLTKAKMK-AERDYFASEGESDPERLAAQKARDQEFLKSLKKV---GIGFIAFLLFYAIVRTVLGLW---------------------------------------- |
| 4P6V Chain:D ((7-208)) | LKKSVLAPVLDNNPIALQVLGVCSALAVTTKLETAFVMTLAVMFVTALSNFFVSLIRNV--RIIVQMAIIASLVIVVDQILKDISKQLSVFVGLIITNCIVMGRAEAFAPIPSFIDGIGNGLGYGFVLMTVGFFRELLGSGKLFGLEVLPNGLMLLAPSAFFLIGFMIWAIRTFKPEQVEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10463 for 439 contacts (23.8/contact) +
2D Compatibility (PS) -8897 + (NN) -4304 + (LL) 4
1D Compatibility (HY) -5600 + (ID) 700
Total energy: -9034.0 ( -20.58 by residue)
QMean score : 0.404
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