Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNSEKVLNLIGLAQRAGRLITGEELVIKAIQNQQVSLIFLANDAGPNLTKKVTDKSNYYKTEVSTVFSTLELSDALGKP--RKVVAVADAGFSKKMRTLMA
3V7E Chain:A ((2-81))
---------SYDKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKKLGKACGIEVGAAAVAIIL------------
General information:
TITO was launched using:
RESULT:
Template:
3V7E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46270 for 588 contacts (-78.7/contact) +
2D Compatibility (PS) -8342 + (NN) -2267 + (LL) 1348
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -59431.0 ( -101.07 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_3V7E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V7E-query.scw
PDB file :
Tito_Scwrl_3V7E.pdb
: