Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTISSAEWEIMRVVWAQQNTTSNEILAVLLEKYDWTPSTVKTLLRRLLDKGYVSREKMGKGFSYSPLIDEDLAMMSEVDSVFQKVCQTKHVAIVRHLLESIPMTEKDRLNLQSSLEAKKGKTLERVACNCIPGQCQCH
3OOP Chain:A ((31-139))
-DVTPEQWSVLEGIEANEPISQKEIALWT----KKDTPTVNRIVDVLLRKELIVREI-RRISLLSLT--------DKGRKETTELRD-IVEASCEKMFA--GVTRTDLEQFTAILKNISTNIE---------------
General information:
TITO was launched using:
RESULT:
Template:
3OOP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49235 for 634 contacts (-77.7/contact) +
2D Compatibility (PS) -10977 + (NN) -3671 + (LL) 2960
1D Compatibility (HY) 0 + (ID) 650
Total energy: -61573.0 ( -97.12 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_3OOP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OOP-query.scw
PDB file :
Tito_Scwrl_3OOP.pdb
: