Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKLIAIDMDGTLLNDEKKIPKENIQAIKEATQAGIKIVLCTGRPMSGILPYFNE-LGLTKEEYIIMNNGCSTYSTKDWQLIDSATLTHDELIFLEEVVKEFPNVCLTLTAENTFYAVGEEVPEIVAYDAD-LVFTKAKSTSLDALRNQEEIVFQAMYMGLDADVTAFQEAVEEALISKFSGVRSQDYIYEIMPQGVTKARGLKSLIAKLGLDINQVMAIGDAPNDIELLDLVPNSVAMGNASDEIKSRCKYITVDNNKAGVAKAIYDYALR
1NF2 Chain:A ((1-263))MYRVFVFDLDGTLLNDNLEISEKDRRNIEKLSR-KCYVVFASGRMLVSTLNVEKKYFKR--TFPTIAYNGAIVYLPE-EGVILNEKIPPEVAKDIIEYIKPL-NVHWQAYIDDVLYSEKDNEE-IKSYARHSNVD-YRVEPNLSELVSKMG-TTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERISTD


General information:
TITO was launched using:
RESULT:

Template: 1NF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173505 for 2193 contacts (-79.1/contact) +
2D Compatibility (PS) -28112 + (NN) -7199 + (LL) 404
1D Compatibility (HY) -14800 + (ID) 2750
Total energy: -225962.0 ( -103.04 by residue)
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_1NF2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NF2-query.scw
PDB file : Tito_Scwrl_1NF2.pdb: