Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTKEKMMSFMTIASIALLGSGVVCANDVADPVAGTTDVVVVPVSPQPTTPSEHTGTDTTNKIVDSTKPSEDKVADSTDQLIPPVKSDLETSEDKVTDPTETKPSKEKTEEPVKSND--SEVIPEQPKSEEVKKAE----ENTGASTTETPKPVTK-PVIETPIVTNTGYTVLGTQDGNVWVQTETGNVLKPAIAIGAVK----QKDGTVALKTKDGKLEVLPSTGETKTILAILGGLAILGAIWVG-WKENIKKYLTFLKKKSKK---------------------------------------------------------------------------------------------------------------- |
| 1YO8 Chain:A ((4-624)) | DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLNLVCATNATYHCIKDNCPHLPNSGQEDFDKDGIGDACDDDDDNDGVTDEKDNCQLLFNPRQADYDKDEVGDRCDNCPYVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQR--------DTDGDGVGDHCDNCPLVHNPDQTDVDNDLVGDQCDNNEDIDDDGHQNNQ-DNCPYISNANQADHDRDGQGDACDPDDDNDGVPDDRDNCRLVFNPDQEDLDGDGRGDICKDDFDNDNIPDIDDVCPENNAISETDFRN--FQMVPLDPKGTTQIDPNWVIRHQGKELVQTANSD---PGIAVGFDEFGSVDFSGTFYVNTDRDD-----------DYAGFVFGYQSSSRFYVVMWKQVTQTYWEDQPTRAYGYSGVSLKVVNSTTGTGEHLRNALWHTGNTPGQVRTLWHDPRNIGWKDYTAYRWHLTHRPKTGYIRVLVHEGKQVMADSGPIYDQTYAGGRLGLFVFSQEMVYFSDLKYECRD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 97008 for 1401 contacts (69.2/contact) +
2D Compatibility (PS) -23918 + (NN) -11221 + (LL) 2384
1D Compatibility (HY) 1600 + (ID) 1950
Total energy: 63903.0 ( 45.61 by residue)
QMean score : 0.006
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