Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEMSFRWYGEDDPVTLENIGQIPTMKGIVTAIYDVPVGEVWSRERIQQLKEKVEAAGLKISVIESVPVHEDIKLGRPTRDLLIDNYIQTVKNLAAEGIDTICYNFMPVFDWTRTDLAYQYPDGSTALIFDETVSKKMDPVNGELSLPGWDASYSKEEMKAIMDAYAEIDEEKLWENLTYFIKRIIPEAEAVGVKMAIHPDDPPYSIFGLPRIITGLEAIERFVKLYDSKSNGITLCVGSYASDPQNDVLEISRRAFELDRVNFVHARNIKLGDGK-SFKESAHPSEYGSIDMYEVIKLCHEFGFEGAIRPDHGRMIWGETGRPGYGLYDRALGATYLSGLYEAVIKGSK |
3QC0 Chain:A ((19-274)) | ----------GFAEAVDICLKH-GITAIAPWRDQ------VAAIGLGEAGRIVRANGLKLTGLCRG--GFFPAPDASGREKAIDDNRRAVDEAAELGADCLVLVAGG----L----------------------------------P-----------------GGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYA--ADRACVNTLGQALDICETLG-PGVGVAIDVYHVWWDP--DLANQIARAGKMKAILAHHICDWLVPTKDMLTDRGMMG--DGVIDLKGIRRRIEAAGFHGAQEVEIFSADNW-WKRP--ADEVIATCVERYRNCC-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104351 for 2134 contacts (-48.9/contact) +
2D Compatibility (PS) -27625 + (NN) -9418 + (LL) 5616
1D Compatibility (HY) 1200 + (ID) 2200
Total energy: -136778.0 ( -64.09 by residue)
QMean score : 0.410
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