Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MRRRIKPIVVAVFFSLFGLLLIIGHLHSTNTLKKELVEAKKTIPSVKASKVPQKSTSSKDKEFVLKPIIDVSGWQLPKEIDYDTLSKNISCVVIRVFGGSKISKTNNAAYTTGIDKSFKTHIKEFQKRNIPVAVYSYALGS-SVKEMKEEAQIFYKNAAPYKPTFYWIDVEEETMSNMNKGVQAFRKELKRLGAKNVGIYIGTYFMTEQGISVKGFDAVWIPTYGSDSGYYEAAPQTELKYDLHQYTSQGYLPGFNQPLDLNQIAVNKDKKKTYEKLFGKVKE |
| 1OJX Chain:A ((3-252)) | NLTEKFLRIFARR-----GKSIILAYDHGIEHGPADFMDNPDSADPEYILRLARDA--------------GFDGVVFQRGIAEKYYDGSVP-LILKLNGKTTLYNGEP-------VSVANCSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVWSYPRGGKVVNETAPEIVAYAARIALELGADAMKIKYTGDPKTFSWAVKVAGKVPVLMS--GGPKTKTEEDFLKQVEGVLEAGA-LGIAVGRNVWQ---RRDALKFARALAELVYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23996 for 2193 contacts (-10.9/contact) +
2D Compatibility (PS) -26461 + (NN) -7990 + (LL) 2712
1D Compatibility (HY) -2800 + (ID) 1400
Total energy: -59935.0 ( -27.33 by residue)
QMean score : 0.191
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