Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIIGIFSLIIIAILAWQGFSFLKHKEIKLQQAVVEKEIRIAEKTVEVVKRQKTERVLFLEPKGYDKSLSADILKWNQKSFEHKKFYDNQYIILRPQLADSNFANVKKLSIYQILYQKEKGSMFQKSSRLLRTYLLDQNKKPFELDELLAHNISGFKAILENIAPGTQLKEHDSNKEFLKTGRVTDGLDVKDGKLIINDLKLPLDKLYNVIDESYLKSSDLDLVSNLKAKAPRVALTFDDGPNEKTTPKALEILKRYNAKATFFVMGQSAV-----GHTDILQRMHAEGHEIGNHTWDHPNLTKLPAEKIKEEIHKTNDLIMKATGQKPVYLRPPYGATNATVKTVT---GLKEMLWSVDTEDWKNHNT-------QAMMTNIKKQL-RPGGVILMHDIHQT-SIDALPTIMDYLITQGYYFVTVGELYSTP |
| 2IW0 Chain:A ((40-240)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QPGLVALTYDDGPFTFT-PQLLDILKQNDVRATFFVNGNNWANIEAGSNPDTIRRMRADGHLVGSHTYAHPDLNTLSSADRISQMRQLEEATRRIDGFAPKYMRAPYLSCDAGCQGDLGGLGYHIIDTNLDTKDYENNKPETTHLSAEKFNNELSADVGANSYIVLSHDVHEQTVVSLTQKLIDTLKSKGYRAVTVGECLGDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67758 for 1474 contacts (-46.0/contact) +
2D Compatibility (PS) -20062 + (NN) -13600 + (LL) 18276
1D Compatibility (HY) -8400 + (ID) 2900
Total energy: -94444.0 ( -64.07 by residue)
QMean score : 0.444
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