Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTVEHFV--TKFVPENYNLFLD--INRQTKTFSGNVAVSGEAL--DNNISFHQKGLTIKSVLLDNQP----------LDFQLDEDNEAMHIQLHET-----GSMVLVFEFSGHITDNMTGMYPSYYTV-NGIKKEVISTQFESHFAREVFPSIDEPEAKATFDLSLKFDQKEGEIALSNMPEINAEQRQETGLWT--FDTTPKMSSYLLAFALGELHGKTTHTKNGTLVGSYATKAHQLNELDFSLDIVVRVIEFYEDYFGVRYP--IPQSLHVALPDFSAGAMENWGLVTYREVYLLVDEN-SSVSSRQQVALVVAHEIAHQWFGNLVTMKWWDDLWLNESFANMMEYVSIDYIEPKLNIFEDFQTGGLPLALKRDATDGVQSVHVEVNHPDEINTLFDPAIVYAKGSRLMHMLRRWLGDTDFAAGLKIYFEKHQYQNTIGRDLWNALSQT--------SGKDVAAFMDSWLEQPGYPVMAAK--IEEDELILTQKQFFIGEHEDKSRLWQIPLNSNWEGIPEI--LTEETVVIPNFSQLAEKNKENGALRFNTENTAHYITNYQGQLLEHIISDLPL----MDNISKLQIVQERHLLAESGMISYSSLIPLVSLLSQETSYLVNSAIKSVIDGLSLFVQEDSQDEFDFKEFVNKL--SAFNFNRLGFEKREGEGDDSEMVRHLSLSLALYSDNEHAIEEAHHIFKAHENNIAAIPAAIRLLVLTNEMKHFESKELSHLLLETYSTTTDGNFKRQLASALSHTTDSKTLKKLLSDWKNKDIVKPQDLAMSWYATFLKNSFTQQSVWEWAQ--ENWEWIKATLGGDMSFDKFVIYPSSSFKTEERLEQYKNFFEPQLSDMAISRNISMGIKEISARVLLITKQKEEVINTIKKYI--- |
| 4WZ9 Chain:A ((40-926)) | QAVDERYRLPTTSIPIHYDLHLRTEIHRNERTFTGTVGIQLQVVQATDKLVMHNRGLVMSSAKVSSLPNGVTGAPTLIGDVQYSTDTTFEHITFTSPTILQPGTYLLEVAFQGRLATNDDGFYVSSYVADNGERRYLATTQFESTSARMAFPCYDEPGLKATFTVSITHSLSY--KAISNMPQKTTTDI-ETDMRTTFFEKTPAMSTYLLAFVVSDFQLRLSGA------QRVYVRPNAFNEATFALEAGVKILKVLDDHLGIPYDTYMPKLDQIAIPDFAAGAMENWGLVTYREQALLFNPAVSTYRGKTNVATTIAHEYAHQWFGNLVSPEWWEYIWLNEGFATLYEFYALDMAYPGQEYWELFNQQVIQYAMGQDGQASTRPMNWNAATPGEISALFDR-VAYDKSGSVLNMMRHVLGDDNWKAGLKAYLTDRALQGAVDEQLYAGLQSAIEGKGVLPNGVTVAQIMRTWTNEAGYPVLNVRRSYDTGDVIISQERFYNDRKVPNTNIWMIPYNYVHQAKADFNEFDDFQWLATKAARIETTVPANEWIVFNKQQVGYYRVNYDEHNWELITNALHENWASIHRLNRAQLIDDAYWLARSGRLDLRVALRFMTYLRNEREYAPWTAANVALTYFNNRLR-GTAEYHNFLIFVDALIEDIYSLLTIDAVSPDDTLLHKYLVQTISTWACSMGYTDCLMKTAALLKAEASGTGPAVHPDIASVTYCYGMRSALESEFQYLYRKMMNSK-NLAERTMLIDSLGCSNNKEFLKAFLTTALGSINYRADERRRVVQAIYSGGRTGVDALIEFLMDPALVNEFVSTLS-TSTLNSALSAIASRTNNVEEMNKLNALITALGSR--VNSQTAANLRTTAQANLDWVNGFEG--LMLSNFLAEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -265687 for 7217 contacts (-36.8/contact) +
2D Compatibility (PS) -86860 + (NN) -13285 + (LL) 1160
1D Compatibility (HY) -50400 + (ID) 10400
Total energy: -425472.0 ( -58.95 by residue)
QMean score : 0.402
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