Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKLSVLDYGLIDYGKTASDAIQETILLSQEAERLGYHQFWVAEHHGVKAFSISNPELMIMHLANQTKSIKIGSGGIMPLHYSSFKLAETLKTLETCHPNRVSIGLGNSLGTVKVSNALRSLHKAHDYEEVLEELKSWLIDKSSSKEPLVQPTL-SSFPDLYVLGSGQKSAYLAAKLGLGFTFGVFPFMDKDPLTEAKKLS-SLYYHQFEEYYPNKSPNLMVAAFVVIADTSEEAENIAKTLDIWMLG-NKDFNEFATFPTIEEANHY-QLT-PEQKAKIKSNRHRMIVGDPKQVKDSLDALVNASQAEELLLIPLVPGLDQRIKSLKLLSQLY----- |
| 4US5 Chain:A ((4-338)) | HVKLSVVEQAPVVEGLTPAHSLQHSIELARLADRLGYERFWVAEHHAEIFNAVPAPEILIARIAAETSGIRVGSGGVLLSLYSPLKVAEVFRTLHALYPDRIDLGIGRANRVKLPVFAALRDDSSDDLWRRLEQLRAYL--DPDSGLPFTVSPRMPGGPALWLLGASVSSAEAAARLGLPYAYAHFITPQF------TREAMDTYRAAFVPGPDTPSPRPILSVVVCCAETDAEAQRVYATHRLFHRRMSQ--GDVRLLPPADLAVAEMDKPGPDPLAEESFEWPRYVVGSPDRVRDQLTKMADATGAEELGVVSMIHDQRDRLRSYRLLAEAFELTPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4US5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151552 for 2704 contacts (-56.0/contact) +
2D Compatibility (PS) -34321 + (NN) -17405 + (LL) 444
1D Compatibility (HY) -14400 + (ID) 4600
Total energy: -221834.0 ( -82.04 by residue)
QMean score : 0.541
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