Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYLDNAATTALTPSVIEKMTNVMTSNYGNPSSIHTFGRQANQLLRECRQIIAEYLNVNSREIIFTSGGTESNNTAIKGYALANQ------LKGKHIITSEIEHHSVLHTMTYLSERFGFDITYLKPN--HGQITAKDVQEALRDDTIMVSLMFANNETGDFLPIQEIGQLLRNH----------QAVFHVDAVQVFSKMELDPHSLGIDFLAASAHKFHGPKGVGILYCAPH-HFDSLLHGGD---QEEKRRASTENIIGIAGMSQALTDATTNTLKNWTHISQLRTTFLDAISDL-DFYLNNGQ-----DCLPHVLNIGFPRQN--NGLLLTQLDLAGFAVSTGSACTAGTV-EPSHVLTSLYGANSPRLNESIRISFSELNTQEEILELAKTLRKIIGD |
| 3A9Z Chain:A ((19-426)) | KVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQ-TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVL--AQCQTLLASVGASCHSDHEDRPSPVLLSCG-IPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184318 for 3302 contacts (-55.8/contact) +
2D Compatibility (PS) -39106 + (NN) -11155 + (LL) 4
1D Compatibility (HY) -18400 + (ID) 5550
Total energy: -258525.0 ( -78.29 by residue)
QMean score : 0.516
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