Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYQEALEWIHSKLAFGIKPGLERMRWMLEQLGNPQNNLSAIHVVGTNGKGSTTSYLQHIFTNSGYQVGTFTSPYIVDFRERISIDGQMIPESDFIKLVETVRPVVERLHLETNLEPATEFEVITVLMFYYFGNSCPVDIVIIEAGMGGYYDS-----TNMFKALAVTCPSIGLDHQEVLGRTYVDIAEQKVGVLK---KGVPFVYANDRQDVEEVFQIKAKETHSQTYRLHNDFYIK--E--E-ENYFNYIGPQANIDHIQLQMPGHHQVSNASIAITTSLLLRDKYPKLTLQTIKDGLE-MTKWVGRTELIFPNVMIDGAHNNESVDALVQVIKKYQQKNVHILFAAINTKPIESMLESLSSIAPVSVTSFDYPKSINLDKYPKAYTRVSDWKKWLHDINLTSDKDFYVITGSLYFISQVRQELLLIKTTTT |
| 3EAG Chain:A ((107-326)) | -------------------------------------HHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENF-------GVSAR----------------------------LPQ---T--PRQDPNS-QSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFA-DLGAIQTQFHYLVRTVPSEGLIVCNGRQQSLQDTLDKGC---WTPVEKFGTEHGWQAGEANADGSFD-VLLDGKTAGRVKWDLMGRHNRMNALAVIAAARHV-----GVDIQTACEALGAFKNVKR------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146186 for 1698 contacts (-86.1/contact) +
2D Compatibility (PS) -22153 + (NN) -6400 + (LL) 16712
1D Compatibility (HY) -3200 + (ID) 1600
Total energy: -162827.0 ( -95.89 by residue)
QMean score : 0.426
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