Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIDFRAEVDKRKDALMDDLINLLRINSERDDSQADAEHPFGPGPVKALEFFLEMAERDGYETKNV----------DNYAGHFTFG--QGEEELGIFGHLDVVPAGSGWDTDPYEPVIKDNRLYARGS----SDDKGPTMACYYALKIIKELGLPTSKKVRFVVGTDEESGWGDMDYYFEHVGLPKPDFGFSPDAEFPIINGEKGNITGYLHFSGENKGAVRLHSFSGGLRENMVPESATARFTSHLDQTTLGASLADFASKHNLKAELSVEDEQYTATVYGKSAHGSTPQEGVNGATYLALYLSQFDFEGPARAFLDVTANIIHEDFSGEKLGVAYEDDCMGPLSMNAGVFQFDE--TN--DDNTIALNFRYPQGTDAKTIQTKLEKLNGVE------KVTLSD-HEHTPHYVPMDDELVSTLLAVYEKQTGLKGHEQVIGGGTFGRLLE-RGVAYGAMFPGDENTMHQANEYMPLENIFRSAAIYAEAIYELIK |
| 3RZA Chain:A ((19-392)) | --------GMINEQRLLNTFLELVQIDSETGN------------ESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIE--VPKLYLTSHMDTVVPA--INVKPIV--KDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEESGLIGAKELNSEL--LDADFGYAIDASAD-----VG---------------------------TT---------------------------VVGAPTQ-----MLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLGQ-----------------------------VDEITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTVEQSYPGFKINDNEAVVKIAQESARN-LGLSANTIISGGGSDGSIINTFGIPSVILGVGY-EKIHTTNERMPIKSLNLLASQVLEIIKIVAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50423 for 2945 contacts (-17.1/contact) +
2D Compatibility (PS) -37626 + (NN) -21230 + (LL) 5732
1D Compatibility (HY) -6800 + (ID) 3750
Total energy: -114097.0 ( -38.74 by residue)
QMean score : 0.417
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