Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNTWKKLLVSTAALSVVAGGAIAATHSNSVDAASKTTIKLWVPTD-SKASYKAIVKKFEKENKGVTVKMIESNDSKAQENVKKDP--SKAADVFSLPHDQLGQLVESGVIQEIPEQYSKEIAKNDTKQSLTGAQYKGKTYAFPFGIESQVLYYNKTKLTADDVKSYETITSKGKFGQ-----QLKA--ANSYVTGPLFLSVGDTLFGKSGED--AKGTNWGNEAGVSVLKWIADQKKNDGFVN-LTAENTMSKFGDGSVHAFESGPWDYDAAKKAVGEDKIGVAVYPTMKIGDKEVQQKAFLGVKLYAVNQAPAGSNTKRISASYKLAA-YLTNAESQKIQFEKRHI-VPANSSIQSSDSVQKDELAKAVIEMGSSDKYTTVMPKLSQMSTFWTESAAILSDTYSGKIKSSDYLKRLKQFDKDIAKTK |
| 3PY7 Chain:A ((4-373)) | -----------------------------------EEGKLVIWINGDKGYNGLAEVGKKFEKD-TGIKVTVEH--PDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPAAA--FQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPN-PPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTS-A-VNYGVTVLPTFKG-QP---SKPFVGVLSAGINAASP-----NKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYE-EE-LAKDPRIAATMEN---AQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAMDDLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42023 for 3053 contacts (-13.8/contact) +
2D Compatibility (PS) -37791 + (NN) -10060 + (LL) 2816
1D Compatibility (HY) -14400 + (ID) 4150
Total energy: -105608.0 ( -34.59 by residue)
QMean score : 0.376
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