Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTILLGLVGLSAMTLAACSNGQSSKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKLTGYEIDMMKAIAKKLKIKVKFVEVGVAESFTSVDSGKVDVAVNNFDTTPERLKKYNFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQYMKIAKQQ----GAEPVIYDNVTNDVYLRDVSTGRTDFIPNDYYTQVIAVKYV-TKQYPD--IKVKMGDV----KYNPTEQGIVMSKKDKSLKTKIDAAIKDMKKDGSLKKISEKYYAGQDLTKEPAGTDKIPVIKVK |
| 1LST Chain:A ((2-233)) | -----------------------------------LPQTVRIGTDTTYAPFSSKDAKGEFIGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGS-PIQ--PTLESLKGKHVGVLQGSTQEAYANDNWRTKGVDVVAYAN--QDLIYSDLTAGRLDAALQDEVA----ASEGFLKQPAGKEYAF-AGPSVKDKKYFGDGTGVGLRKDDTELKAAFDKALTELRQDGTYDKMAKKYFDFNVYGD-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LST.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18702 for 1814 contacts (-10.3/contact) +
2D Compatibility (PS) -24076 + (NN) -9454 + (LL) 3876
1D Compatibility (HY) -8800 + (ID) 2650
Total energy: -59806.0 ( -32.97 by residue)
QMean score : 0.475
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