Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKQGEPDPESNSALKFVLDRAKQAQVPKHVIDKAIDKAKGNTDETFVEGRYEGFGPNGSMIIVDTLTSNVNRTAANVRTAYGKNGGNMGASGSVSYLFDKKGVIVFAGDDADTVFEQLLEADVDVDDVEAEEGTITVYTAPTDLHKGIQALRDNGVEEFQV-TELEMIPQSEVVLEGDDLETFEKLID-ALESDDDVQKVYHNVADF |
| 2DJW Chain:A ((5-73)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------FVLIRPRGNRVQALGEAIAELP--QVAEVYSVTGPYDLVALVRLKDVEELDDVVTQGILSLEGVERTETLLAFR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23303 for 456 contacts (-51.1/contact) +
2D Compatibility (PS) -7122 + (NN) -2809 + (LL) 9240
1D Compatibility (HY) -2800 + (ID) 250
Total energy: -27044.0 ( -59.31 by residue)
QMean score : 0.418
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