Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKQKVMATLLLSTLVLSLSSPLVTLAETINPETSLTMATASTESSSEAEKQEKTQPTDSETASPSAEGSISTEKTEIGTTETSSSNESSSSSSHQSSSNEDAKTSDSASTASTPSTNTTNSSQADSKPGQSTKTELKPEPTLPLVEPKITPAPSQIESVQTNQNASVPALSFDDNLLSTPISPVTATPFYVEHWSGQDAYSHYLLSHRYGIKAEQLDGYLKSLGIQYDSNRINGAKLLQWE-KDSGLDVRAIVAIAVLESSLGTQGVAKMPGA---NMFGYGAFDHDSSHASAYNDEEAIM--LLTKNTIIKNNNSSFEIQDLKAQKLSSGQLNTVTEGGVYYTDNSGTGKRRAQIMEDLDRWIDQHGGTPEIPAALKAL--STASLADLPSGFSLSTAVNTASYIASTYPWGECTWYVFNRAKELGYTFDPFMGNGGDWQHKA-GFETTHSPKVGYAVSFSPGQAGADGTYGHVAIVEEVKKDGSVLISESNAMGRGIVSYRTFSSAQAAQLTYVIGHK |
| 3OQC Chain:A ((1-461)) | ------------MDILFRIRGGFDLAFQLAPP------------------------------KEMFIKNALRQVLSDLTTKLSSDALVLRVCNSLWPNSDGELTDSSACKNVVRFITQQIVNIDLMLEISHYINMSLPIDAVVSVAPEESWGKVRKLLVDAILRQLVDVEKCILRYMKGTSIVVPEPLHFQLPG-KKNLVTVLYPSGIPDDQLQAYRKELHDLFNLPHDRPYFKRINAYHFPDELYKDGYIRNPHTYLSPPNIEGSMICVVQGTYAYHHYMQDRID-DNGWGSAYRSLQTICSWFRHQGYTERSIPTHREIQQALVDA-----------------------GDKPATFVGSRQWI----GSIEVQMVLNQLIGVTSKILFVNQGSEMASQGRELANHFQN-------------------VGTPVMVGGGVLAHTILGVAWNETTGQIKFLILDPHYTGAED-------LQVMLEKGWCGWKSPDFWNKD-AYYNLCLPQRPNAL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 48013 for 3058 contacts (15.7/contact) +
2D Compatibility (PS) -42699 + (NN) -4586 + (LL) 6012
1D Compatibility (HY) -6000 + (ID) 2150
Total energy: -1410.0 ( -0.46 by residue)
QMean score : 0.099
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