Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------MIKILAACGAGVNSSHQIKDAIETQLGDRGYNVHCDAVMVKDITEEMVNKYDIFTPIAKTDLGFNVPIPVVEAGPILYRIPVMSEPVFTALEQVIKEHNLS
1TVM Chain:A ((1-113))
MGSSHHHHHHHHENLYFQGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIP--------LVHGMPFVSGVGIEALQNKILTILQG
General information:
TITO was launched using:
RESULT:
Template:
1TVM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48656 for 594 contacts (-81.9/contact) +
2D Compatibility (PS) -9773 + (NN) -1325 + (LL) 384
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -64770.0 ( -109.04 by residue)
QMean score : 0.343
(partial model without unconserved sides chains):
PDB file :
Tito_1TVM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TVM-query.scw
PDB file :
Tito_Scwrl_1TVM.pdb
: