Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MAKCLTLNTHSWMEVNALKKLFDLAEHIFR--EKYDIICLQEVNQSISSPLAKSSPNYHPIEGTPALHQDNFALQLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLKPLKPEDILVSAVDDETDYHTRRALVAETTLNDKVVTVVSLHLSWFEKGFAEEWKRLETTLLEVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQI-----ANHVFGDHTIMADIDGWEGNKKALKVDHIFTSEDLSISSSQVVFEGGEAPVVSDHYGLEITMDF |
| 1SR4 Chain:B ((1-261)) | NLSDFKVATWNLQG-SSAVNESKWNINVRQLLSGEQGADILMVQEAGSLPSSAVRTSRVI--------QHGGTPIEEYTWNLGTRSRPNMVYIYYSRL---DVGANRVNLAIVSRRQADEAFIVHSDSSVLQSRPAVGIRIGTDVFFTVHALATGGSDAVSLIRNIFTTFNSPPERRVYSWMVVGDFN--RAPANLEVALRQEPAVSENTIIIAPTEPTHRSGNILDYAILHDAHLPRREQARERIGASLMLNQLRSQIT---------SDHFPVSFVRDR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1SR4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -75084 for 2060 contacts (-36.4/contact) +
2D Compatibility (PS) -26294 + (NN) -2104 + (LL) 488
1D Compatibility (HY) 800 + (ID) 1800
Total energy: -103994.0 ( -50.48 by residue)
QMean score : 0.249
|
|
|