Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKITKMVISSVLATVLMTACSQSSQNGQSDVKHIGILQYVE-HPSLTATRKGFIKELAKEGYKDGKNIKIEYKNAQGDQSNIQSISEKLIKD-NKLVLGIATP--AAQSLTTV--STETPILFTAVTDPVSAELVKSMKKPEGLATGTSDMSPIKKQVSLLRKVMPKVKRVGIMYTTS-ERNSEVQVKQAKKIFQEAGIKTSVKG-ISSTNDVQDTAKSLMS---KTEVIFVPTDNIIASSVTLLGNLSK---ELKVPVVGGSADM-----VPSGL-LFSYGADYEALGRQTARQAVKILKGK-DVAKVPSEYPQNLKVVVNEDMAKELGIDVSSIKNNK |
3ROT Chain:A ((3-273)) | -------------------------------RDKYYLITHGSQDPYWTSLFQGAKKAAEELKVD----LQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRPKDKT------KNPYLVFLGSDNLLAGKKLGEKALELTPSAKRALVLNPQPGHIGLEKRAYGIKTILQDKGIFFEELDVGTDPNQVQSRVKSYFKIHPETNIIFCLTSQALDPLGQMLLHPDRYDFNYQPQVYSFDKTPNTVSLIHKKLVNYVMDQQPFLMGYLSITQLVLMNRYQLNPVNINTAM--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ROT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62051 for 2070 contacts (-30.0/contact) +
2D Compatibility (PS) -27253 + (NN) -11755 + (LL) 4804
1D Compatibility (HY) -1200 + (ID) 1900
Total energy: -99355.0 ( -48.00 by residue)
QMean score : 0.516
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