Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLRRPVLEDKEEILAMYKEFQKESSSVDGGFYE-PTMHFEDWLDHNLNMELGVGVPDNFVPYIQFVSFDNDNNAIGFLNLRLRLNDTLLEKGGHIGYSIRPRQRGKGYAKEQLKLGIEQAH-LKNINEILVTCHVDNDASKSVILANGGVLEDCLHQTERYWIT
3WR7 Chain:A ((3-142))
VKLRPLEREDLRYVHQLDNNASVMR--YWFEEPYEAFVELSDLYDKHIHD-----------QSERRFVVECDGEKAGLVELVEINHV---HRRAEFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQ
General information:
TITO was launched using:
RESULT:
Template:
3WR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10152 for 925 contacts (-11.0/contact) +
2D Compatibility (PS) -15122 + (NN) -9094 + (LL) 696
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -39622.0 ( -42.83 by residue)
QMean score : 0.311
(partial model without unconserved sides chains):
PDB file :
Tito_3WR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WR7-query.scw
PDB file :
Tito_Scwrl_3WR7.pdb
: