Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKQYWFIILTYIIMQFSALIAIPLLFKFGYAGGQPTDENMLHAQGLWSVISFIACLV-------------VVLLILRT----VPKETLRNGQKDSIGLSILWAIAGFFIALFSQGIAGSIEYYVFGIGRESENTQAILDVIQAVPLMIIVSSIVGP-----ILEEIIFRKIIFGALYEKTNFFF---AGLISSVIF---GIVHADLKHLLLYTAMGFTFAFLYARTKRIWVPIFAHLMMNTFVVIMQLEPVRNYLEQQSTQMQLIIGGLFL---------------
4TQ3 Chain:A ((15-301))--SKYLRLLRPVAWLCFLLPYAVGFGFGITPNASLQHAVLGLLSFAFWMAFSFTINALYDRDVDRLHDGLNLSMQPLVTGEISVREAWLYCIAFLALSLATAAAINEKFFLAMLGANIIGYVYSAPPRFKAWPVMDVICNALAAVLAFYAGLSIGGAEVPIAIYPAAFFLAATFYIPTAVSDYEFDKKAGLKNTPVFFGPERALKSLYPLSAITVILWAYVFLMA--ERIEIKVISPLIIAYTLIYTFIINSRWDGEKLNVSPNLILTPFGIISALFIAYGFAVISV


General information:
TITO was launched using:
RESULT:

Template: 4TQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1069 -198840 -186.01 -828.50
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -186.01
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.239

(partial model without unconserved sides chains):
PDB file : Tito_4TQ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TQ3-query.scw
PDB file : Tito_Scwrl_4TQ3.pdb: