Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYVIAAPEMLATTAADVDGIGSAIRAASASAAGPTTGLLAAAADEVSSAAAALFSEYARECQEVLKQAAAFHGEFTRALAAAGAAYAQAEASNTAAMSGTAGSSGALGSVGMLSGNPLTALMMGGTGEPIL-SDRVLAIIDSAYIRPIFGPNNPVAQ-YTPEQWWPFIGNLSLDQSIAQGVTLLNNGINAEL--QNGHDVVVFGYSQSAAVATNEIRALMALPP--GQAPDPSRLAFTLIGNINNPNGGVLER---YVGLYLPFLDMSFNGAT-PPDSPYQTYMYTGQYDGYAHNPQYPLNILSDLNAFMGIRWVHNAYPFTAAEVANAVPLPTSPGYTGNTHYYMFLTQDLPLLQPIRAIPFVGTPIAELIQPDLRVLVDLGYGYGYADVPTPASLFAPINPIAVASALATGTVQGPQAALVSIGLLPQSALPNTYPYLPSANPGLMFNFGQSSVTELSVLSGALGSVARLIPPIA |
3HC7 Chain:A ((4-173)) | ----------------------------------------------------------------------------------------------------------------------PWLFTVHGTGQPDPLGPGLPADTARDVLDI----YRWQPIGNYPAAAFP------MWPSVEKGVAELILQIELKLDADPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMRQKGFAHSDEWIHPVAAPDTLGILEDRLENLEQYGFEVRDYAHDGDMYASIKE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HC7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40176 for 1333 contacts (-30.1/contact) +
2D Compatibility (PS) -17426 + (NN) -14957 + (LL) 18648
1D Compatibility (HY) 1200 + (ID) 1450
Total energy: -54161.0 ( -40.63 by residue)
QMean score : 0.367
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