Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAISCSPRPRYASRMPVLSKTVEVTADAASIMAIVADIERYPEWNEGVKGAWVLARYDDGRPSQVRLDTAVQGIE-GTYIHAVY-YPG-ENQIQTVMQQGE-LFAKQEQLFSVVATG--AA--SLLTVDMDVQVTMPVPEPMVKMLLNNVLEHLAENLKQRAEQLAAS
3K3K Chain:A ((49-199))
---------------SCSSLHAQRIHAPPELVWSIVRRFDKPQTYKHFIKSCSVEQNFEMRVGCTRDVIVI-SGLPANTSTERLDILDDERRVTGFSIIGGEHRLTNYKSVTTVHRFEKENRIWTVVLESYVVDMPEGNSEDDTRMFADTVVKLNLQKLATVAEAMA--
General information:
TITO was launched using:
RESULT:
Template:
3K3K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51168 for 990 contacts (-51.7/contact) +
2D Compatibility (PS) -15354 + (NN) -6366 + (LL) 1144
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -75044.0 ( -75.80 by residue)
QMean score : 0.249
(partial model without unconserved sides chains):
PDB file :
Tito_3K3K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K3K-query.scw
PDB file :
Tito_Scwrl_3K3K.pdb
: