Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MSPRRW---LRAVAVIGATAMLLASSCTWQLSLFITDGVP---------PPPGDPVPPVDTHAGGRPADQLREW-------------AEKRAAALGIPVIA---------LEAYAYAARVAEVE-NPKCHLAWTTLAGIGRVESHHGTYRGATI-APNGDVSP--PIRGVRLDGTGGT---LRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYA-------RAVRDWATAYAAGHPL-------- |
| 4INO Chain:A ((34-335)) | QEVKVKDYFGEQTIKLPVSKIIYLGSFAEVPAMFHTWDRVVGISDYAFKSDIVKATLKDPERIKPMSSDHAAALNVELLKKLSPDLVVTFVGNPKAVEHAKKFGISFLSFQEKTIAEVMEDIDTQAKALEVDASKKLAKMQETLDFIAERLKGVKKKKGVELFHKANKISGHQALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKENP-EIIFIWWISPLSPEDVLNN--PKFATI--KAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEVEPFLWH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4INO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85624 for 1722 contacts (-49.7/contact) +
2D Compatibility (PS) -25110 + (NN) -7862 + (LL) -292
1D Compatibility (HY) -8400 + (ID) 2200
Total energy: -129488.0 ( -75.20 by residue)
QMean score : 0.277
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